STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99872.1Sterol desaturase. (310 aa)    
Predicted Functional Partners:
AKJ07324.1
Sterol desaturase.
  
     0.761
AKI99873.1
Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family.
       0.655
AKJ05968.1
Sterol desaturase family protein.
  
     0.537
AKI99870.1
Circadian clock protein KaiC.
       0.518
AKI99871.1
Adenylate cyclase.
  
    0.518
AKJ06224.1
Putative inner membrane protein.
 
     0.501
AKJ00266.1
Hydroxymethylglutaryl-CoA synthase.
   
 
 0.465
AKJ01644.1
Hydroxymethylglutaryl-CoA synthase.
   
 
 0.465
AKJ00951.1
Ser/Thr and Tyr protein phosphatase.
  
 
 0.446
AKI99895.1
Nuclease protein.
   
    0.445
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.