Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKI99872.1Sterol desaturase. (310 aa)    
Predicted Functional Partners:
AKJ07324.1
Sterol desaturase.
  
     0.761
AKI99873.1
Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family.
       0.655
AKJ05968.1
Sterol desaturase family protein.
  
     0.537
AKI99871.1
Adenylate cyclase.
  
    0.519
AKI99870.1
Circadian clock protein KaiC.
       0.518
AKJ06224.1
Putative inner membrane protein.
 
     0.502
AKJ00266.1
Hydroxymethylglutaryl-CoA synthase.
   
  
 0.465
AKJ01644.1
Hydroxymethylglutaryl-CoA synthase.
   
  
 0.465
AKI99895.1
Nuclease protein.
   
    0.448
AKJ00951.1
Ser/Thr and Tyr protein phosphatase.
  
 
 0.433
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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