STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99884.1Beta-lactamase. (380 aa)    
Predicted Functional Partners:
AKJ00049.1
ATP-binding protein syrD.
 
      0.852
AKJ05242.1
N-acyl-D-amino-acid deacylase.
     0.771
AKI99883.1
Hypothetical protein.
       0.757
AKJ06368.1
Beta-lactamase class C and other penicillin binding protein.
  
     0.756
AKJ01566.1
Beta-lactamase class C and other penicillin binding protein.
  
     0.741
AKI99885.1
Serine/threonine-protein kinase Pkn6.
       0.566
AKJ04562.1
Hypothetical protein.
 
  
 0.438
AKI99886.1
Hypothetical protein.
       0.406
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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