Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKI99892.1Putative esterase. (257 aa)    
Predicted Functional Partners:
AKJ02786.1
Isochorismatase.
  
  
 0.851
AKI99891.1
Hypothetical protein.
       0.768
AKI99890.1
Carbamoylphosphate synthase large subunit.
 
     0.759
AKJ02553.1
Carbamoylphosphate synthase large subunit.
 
     0.759
AKJ02953.1
Hypothetical protein.
 
     0.755
AKJ08163.1
Putative esterase.
 
     0.752
AKJ01414.1
IroE protein.
  
     0.741
AKJ02918.1
Putative esterase.
 
  
 0.563
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.547
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.547
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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