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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99903.1OmpA domain protein. (609 aa)    
Predicted Functional Partners:
AKJ06767.1
Flagellar motor rotation protein MotB.
  
 
 0.784
AKI99902.1
Internalin, putative.
  
   0.772
AKJ04614.1
Outer membrane protein A precursor.
  
     0.722
AKJ08187.1
Flagellar motor rotation protein MotB.
  
 
 0.702
AKI99904.1
Putative outer membrane protein.
 
     0.622
AKJ07137.1
Vitamin K-dependent gamma-carboxylase.
  
    0.525
AKI99024.1
Universal stress protein.
   
  
 0.513
AKJ04162.1
Universal stress protein.
   
  
 0.513
AKJ06518.1
Universal stress protein.
   
  
 0.513
rpsF
SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.
 
   0.468
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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