STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99908.1L-proline glycine betaine binding ABC transporter protein ProX. (495 aa)    
Predicted Functional Partners:
AKI99907.1
L-proline glycine betaine ABC transport system permease protein.
 0.999
AKJ00859.1
Alpha,alpha-trehalose-phosphate synthase.
  
  
 0.656
AKI99909.1
Adenylate cyclase.
       0.636
AKI98782.1
Dimethylhistidine N-methyltransferase.
 
     0.609
AKI99762.1
Amino acid ABC transporter binding protein and permease protein.
     
 0.570
AKJ07534.1
Transcriptional regulator, MarR family.
  
  
 0.566
AKI98395.1
Transcriptional regulator, MarR family.
  
  
 0.564
AKI98423.1
Transcriptional regulator, MarR family.
  
  
 0.564
AKI98675.1
Transcriptional regulator, MarR family.
  
  
 0.564
AKI99560.1
Transcriptional regulator, MarR family.
  
  
 0.564
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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