Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99919.1Response regulator of zinc sigma-54-dependent two-component system. (973 aa)    
Predicted Functional Partners:
AKJ00529.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.743
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKI99918.1
Hypothetical protein.
       0.634
AKI99920.1
Hypothetical protein.
       0.497
AKI99917.1
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA.
       0.478
AKJ04331.1
Flagellar synthesis regulator FleN.
  
 
 0.441
AKI99912.1
Myosin heavy chain.
  
     0.436
AKJ08495.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.412
AKJ04336.1
Flagellar sensor histidine kinase FleS.
  
 
 0.404
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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