STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99923.1Succinate-semialdehyde dehydrogenase. (470 aa)    
Predicted Functional Partners:
AKJ06405.1
Alcohol dehydrogenase.
 
 0.938
AKJ03416.1
Succinate dehydrogenase flavoprotein subunit.
  
 0.933
AKJ03417.1
Succinate dehydrogenase iron-sulfur protein.
   
 
 0.921
AKJ00631.1
Succinate dehydrogenase cytochrome b558 subunit.
   
 
 0.907
AKI99644.1
Citrate synthase.
  
 0.885
AKJ03389.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.885
AKJ05626.1
Citrate synthase.
  
 0.885
AKI99579.1
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.843
AKJ07087.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.843
AKJ07293.1
Isocitrate dehydrogenase.
  
 0.839
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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