STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99925.1Hypothetical protein. (476 aa)    
Predicted Functional Partners:
AKI99926.1
Hypothetical protein.
       0.572
AKI99927.1
Methyltransferase.
       0.486
AKJ05398.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.482
AKJ00199.1
Protein-L-isoaspartate O-methyltransferase.
   
    0.451
AKJ05924.1
SdeA.
   
    0.451
AKJ05925.1
SdeA.
   
    0.451
AKJ07178.1
SdeA.
   
    0.451
AKJ08077.1
SdeA.
   
    0.451
AKJ01874.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.420
AKJ02048.1
Enoyl-CoA hydratase.
    
 0.420
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.