STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99931.1Diguanylate cyclase/phosphodiesterase. (422 aa)    
Predicted Functional Partners:
AKJ03675.1
Hypothetical protein.
 
 
 0.936
AKJ03672.1
Sensory box histidine kinase/response regulator.
 
 
 0.930
AKJ01344.1
Sensory box histidine kinase.
 
 
   0.927
AKJ01450.1
Hypothetical protein.
 
 
  
0.926
AKJ03002.1
Circadian input kinase A.
 
 
0.925
AKI99265.1
Chemotaxis protein methyltransferase CheR.
  
0.922
AKJ01622.1
Circadian input kinase A.
 
0.920
AKJ05671.1
Multi-sensor hybrid histidine kinase.
 
 
  
0.915
AKJ02191.1
Sensory box histidine kinase.
 
 
  
0.903
AKJ07804.1
Osmosensitive K+ channel histidine kinase KdpD.
 
 
  
0.902
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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