Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99944.1Alkaline ceramidase. (693 aa)    
Predicted Functional Partners:
AKJ01658.1
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
  
  
  0.924
AKJ00391.1
Dihydrosphingosine delta-4 desaturase.
  
  
  0.916
AKJ02458.1
Glycosyltransferase.
     
 0.901
AKJ06049.1
Dihydrosphingosine delta-4 desaturase.
     
  0.900
AKJ06828.1
N-acetylglucosamine-6-phosphate deacetylase.
  
 
 0.738
AKI99943.1
Sensory box histidine kinase/response regulator.
       0.610
AKJ07251.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
     0.587
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
  
 0.530
zwf-2
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
  
 0.530
AKJ00561.1
Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.514
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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