STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99949.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
AKI99950.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.773
AKJ02042.1
RTX toxin.
  
     0.772
AKI99287.1
Hypothetical protein.
  
     0.752
AKJ02201.1
Hypothetical protein.
  
     0.751
AKI99817.1
Hypothetical protein.
  
     0.750
AKJ07994.1
Trehalose synthase.
  
     0.746
AKJ01134.1
Trehalose synthase.
  
     0.745
AKJ06239.1
Trehalose synthase.
  
     0.744
AKJ07549.1
Hypothetical protein.
  
     0.741
AKJ04075.1
Hypothetical protein.
  
     0.734
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.