Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKI99959.1Transcriptional regulator, AraC family. (234 aa)    
Predicted Functional Partners:
AKI99960.1
Putative fatty acid desaturase.
 
   
 0.727
AKJ08357.1
Transcriptional regulator, AraC family.
  
     0.716
AKJ05362.1
Transcriptional regulator, AraC family.
  
     0.697
AKJ00419.1
Transcriptional regulator, AraC family.
 
 
 0.683
AKJ05015.1
Transcriptional regulator, AraC family.
  
     0.645
AKI99958.1
Hypothetical protein.
       0.543
AKJ04632.1
Transcriptional regulator, AraC family.
  
     0.463
AKJ02366.1
Transcriptional regulator.
 
 
 0.424
AKI99961.1
Transcriptional regulator, XRE family.
       0.417
AKI98442.1
Transcriptional regulator, AraC family protein.
  
     0.404
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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