STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99969.1Putative transmembrane protein. (193 aa)    
Predicted Functional Partners:
AKJ03591.1
Hypothetical protein.
      0.618
AKI99970.1
Tryptophan-rich sensory protein.
       0.554
AKJ00213.1
Glutathione S-transferase.
  
     0.523
AKJ00278.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
     0.494
AKI99971.1
ABC transporter ATP-binding protein.
       0.483
AKI99972.1
Membrane protein.
       0.465
AKJ00868.1
Glutathione S-transferase; Belongs to the GST superfamily.
 
     0.410
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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