Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKI99970.1Tryptophan-rich sensory protein. (175 aa)    
Predicted Functional Partners:
AKI99971.1
ABC transporter ATP-binding protein.
       0.664
AKJ08474.1
Deoxyribodipyrimidine photolyase, type II.
  
  
 0.647
AKI99972.1
Membrane protein.
       0.638
AKI99969.1
Putative transmembrane protein.
       0.554
AKJ00244.1
Hydroxyneurosporene synthase.
  
    0.542
AKJ00240.1
Phytoene dehydrogenase.
 
  
 0.522
AKJ03368.1
Glycine amidinotransferase.
   
    0.493
AKJ08109.1
Phytoene desaturase.
 
  
 0.468
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.466
AKI99973.1
Zn-dependent hydrolase.
  
    0.444
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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