STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99971.1ABC transporter ATP-binding protein. (303 aa)    
Predicted Functional Partners:
AKI99972.1
Membrane protein.
 
 
 0.966
AKI98409.1
Membrane protein.
 
 
 0.876
AKJ02488.1
Membrane protein.
 
 
 0.876
AKJ07061.1
ABC transporter, ATP-binding protein.
 
  
0.676
AKI99970.1
Tryptophan-rich sensory protein.
       0.664
AKI99973.1
Zn-dependent hydrolase.
  
   0.507
AKJ02396.1
Gliding motility protein GldF.
 
 
 0.507
AKJ07363.1
Putative membrane spanning protein.
 
 0.499
AKI99969.1
Putative transmembrane protein.
       0.483
AKJ04774.1
Pectin lyase like protein.
  
 
 0.450
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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