Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
AKI99972.1Membrane protein. (1190 aa)    
Predicted Functional Partners:
AKI99971.1
ABC transporter ATP-binding protein.
 
 
 0.963
AKI98410.1
ABC transporter ATP-binding protein.
 
 
 0.866
AKJ02489.1
ABC transporter ATP-binding protein.
 
 
 0.866
AKI99970.1
Tryptophan-rich sensory protein.
       0.638
AKI99973.1
Zn-dependent hydrolase.
       0.508
AKI99969.1
Putative transmembrane protein.
       0.465
AKJ03988.1
Hypothetical protein.
  
 
 0.449
AKI98412.1
ABC-type multidrug transport system, ATPase component.
  
 
 0.429
AKI99887.1
ABC transporter, ATP-binding protein.
  
 
 0.429
AKJ00316.1
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
  
 
 0.429
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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