Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AKI99973.1Zn-dependent hydrolase. (302 aa)    
Predicted Functional Partners:
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.722
AKJ00154.1
Hypothetical protein.
  
     0.715
AKJ03516.1
Hypothetical protein.
  
     0.708
AKJ07049.1
Hypothetical protein.
  
     0.697
AKJ07326.1
SAM-dependent methyltransferase.
  
     0.691
AKJ01505.1
Hypothetical protein.
 
    0.666
AKJ06280.1
Signal recognition particle receptor protein FtsY.
 
     0.659
AKI99740.1
Hypothetical protein.
  
     0.652
AKJ07515.1
Microbial collagenase, secreted.
  
     0.634
AKJ07608.1
Alg9 family protein mannosyltransferase.
  
     0.634
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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