Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
AKI99978.1Trans-aconitate 2-methyltransferase. (737 aa)    
Predicted Functional Partners:
AKI99216.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.753
AKJ04128.1
Hypothetical protein.
  
     0.750
AKJ02365.1
Putative Ig-like domain protein.
  
     0.744
AKJ00312.1
High-affnity carbon uptake protein Hat/HatR.
 
     0.727
AKJ00989.1
Transcriptional regulator, AraC family.
  
     0.723
AKJ02525.1
Hypothetical protein.
  
     0.723
AKI99751.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
 
   
 0.719
AKJ02027.1
Hypothetical protein.
  
     0.706
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
     0.700
AKJ04268.1
Hypothetical protein.
  
     0.700
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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