Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99995.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
AKJ00362.1
Ankyrin repeat protein.
  
     0.769
AKI99626.1
Ankyrin repeat protein.
  
     0.765
AKI98803.1
Hypothetical protein.
  
     0.722
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.713
AKJ07375.1
Chaperone protein DnaK.
 
 0.685
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
 0.590
AKJ07976.1
Hypothetical protein.
    
 0.558
AKI99996.1
Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR.
       0.551
AKJ07821.1
Hypothetical protein.
    
 0.548
AKI99993.1
Hypothetical protein.
       0.542
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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