Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99998.1Hypothetical protein. (1219 aa)    
Predicted Functional Partners:
AKJ01845.1
Serine/threonine protein kinase.
  
     0.739
AKJ02913.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
 
 0.650
AKJ05907.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.620
AKJ06283.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.619
AKJ01181.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.610
AKI99585.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.608
AKJ01895.1
Putative protein phosphatase.
 
   0.601
AKI99999.1
Hypothetical protein.
       0.569
AKI98900.1
Hypothetical protein.
 
     0.460
AKJ06639.1
Heterocyst differentiation protein.
  
     0.408
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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