STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00003.1Regulatory sensor-transducer, BlaR1/MecR1 family. (469 aa)    
Predicted Functional Partners:
AKJ00004.1
Transcriptional regulator, BlaI/MecI family.
 
  
 0.946
AKJ00002.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
      0.867
AKI99212.1
Transcriptional repressor, BlaI/MecI family.
 
  
 0.852
AKJ03674.1
Transcriptional regulator, MecI family.
 
  
 0.836
AKJ00001.1
Hypothetical protein.
 
     0.658
AKJ05385.1
Transcriptional regulator, MecI family.
 
  
 0.516
AKJ00603.1
Aminopeptidase.
  
     0.491
AKJ00005.1
Hypothetical protein.
       0.485
AKJ01016.1
Hypothetical protein.
  
     0.460
AKJ07579.1
Beta-lactamase.
 
     0.428
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.