Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKJ00003.1Regulatory sensor-transducer, BlaR1/MecR1 family. (469 aa)    
Predicted Functional Partners:
AKI99212.1
Transcriptional repressor, BlaI/MecI family.
 
 
 0.985
AKJ03674.1
Transcriptional regulator, MecI family.
 
 
 0.983
AKJ00004.1
Transcriptional regulator, BlaI/MecI family.
 
  
 0.948
AKI99211.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
  
  
 
0.928
AKJ00002.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
      0.867
AKJ00001.1
Hypothetical protein.
 
     0.657
AKJ05385.1
Transcriptional regulator, MecI family.
 
  
 0.543
AKJ00603.1
Aminopeptidase.
  
     0.491
AKJ00005.1
Hypothetical protein.
       0.485
AKJ01016.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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