Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99631.1 | AKJ00006.1 | AA314_01258 | AA314_01632 | Hypothetical protein. | Rhomboid family serine protease. | 0.468 |
AKJ00005.1 | AKJ00006.1 | AA314_01631 | AA314_01632 | Hypothetical protein. | Rhomboid family serine protease. | 0.493 |
AKJ00006.1 | AKI99631.1 | AA314_01632 | AA314_01258 | Rhomboid family serine protease. | Hypothetical protein. | 0.468 |
AKJ00006.1 | AKJ00005.1 | AA314_01632 | AA314_01631 | Rhomboid family serine protease. | Hypothetical protein. | 0.493 |
AKJ00006.1 | AKJ00007.1 | AA314_01632 | AA314_01633 | Rhomboid family serine protease. | Epoxide hydrolase. | 0.545 |
AKJ00006.1 | AKJ05062.1 | AA314_01632 | AA314_06688 | Rhomboid family serine protease. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.561 |
AKJ00006.1 | AKJ05569.1 | AA314_01632 | AA314_07195 | Rhomboid family serine protease. | Sulfur carrier protein adenylyltransferase ThiF. | 0.620 |
AKJ00006.1 | AKJ06692.1 | AA314_01632 | AA314_08318 | Rhomboid family serine protease. | MttA/Hcf106 family domain protein. | 0.433 |
AKJ00006.1 | mltG | AA314_01632 | AA314_05696 | Rhomboid family serine protease. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.432 |
AKJ00006.1 | mltG-2 | AA314_01632 | AA314_08340 | Rhomboid family serine protease. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.432 |
AKJ00006.1 | tatA | AA314_01632 | AA314_06717 | Rhomboid family serine protease. | Chemotaxis protein methyltransferase CheR; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.433 |
AKJ00006.1 | tatB | AA314_01632 | AA314_08540 | Rhomboid family serine protease. | Twin-arginine translocation protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.761 |
AKJ00007.1 | AKJ00006.1 | AA314_01633 | AA314_01632 | Epoxide hydrolase. | Rhomboid family serine protease. | 0.545 |
AKJ05062.1 | AKJ00006.1 | AA314_06688 | AA314_01632 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Rhomboid family serine protease. | 0.561 |
AKJ05569.1 | AKJ00006.1 | AA314_07195 | AA314_01632 | Sulfur carrier protein adenylyltransferase ThiF. | Rhomboid family serine protease. | 0.620 |
AKJ06692.1 | AKJ00006.1 | AA314_08318 | AA314_01632 | MttA/Hcf106 family domain protein. | Rhomboid family serine protease. | 0.433 |
mltG | AKJ00006.1 | AA314_05696 | AA314_01632 | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Rhomboid family serine protease. | 0.432 |
mltG-2 | AKJ00006.1 | AA314_08340 | AA314_01632 | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Rhomboid family serine protease. | 0.432 |
tatA | AKJ00006.1 | AA314_06717 | AA314_01632 | Chemotaxis protein methyltransferase CheR; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Rhomboid family serine protease. | 0.433 |
tatA | tatB | AA314_06717 | AA314_08540 | Chemotaxis protein methyltransferase CheR; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Twin-arginine translocation protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.458 |
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