STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00007.1Epoxide hydrolase. (319 aa)    
Predicted Functional Partners:
AKJ07824.1
Alpha/beta hydrolase fold-containing protein.
  
     0.739
AKJ05744.1
Alpha/beta hydrolase fold protein.
  
     0.733
AKJ01074.1
Hydrolase, alpha/beta fold family.
  
     0.728
AKJ06459.1
Menaquinone biosynthesis related protein.
  
     0.726
AKI99728.1
Putative hydrolase.
  
     0.725
AKJ03065.1
Hydrolase, alpha/beta fold family.
  
     0.714
AKJ00518.1
Hydrolase, alpha/beta hydrolase fold family.
  
     0.692
AKJ04271.1
Alpha/beta hydrolase fold-1 precursor.
  
     0.691
AKJ06606.1
Hydrolase, alpha/beta fold family.
  
     0.619
AKJ07030.1
Hydrolase, alpha/beta fold family.
  
     0.613
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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