STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00030.1Response regulator. (135 aa)    
Predicted Functional Partners:
AKJ00031.1
Sensory box histidine kinase.
  
   0.646
AKI99496.1
PAS/PAC domain protein.
  
 
 0.594
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.559
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.507
AKJ00035.1
Hypothetical protein.
  
 
 0.497
AKJ02957.1
Sensor histidine kinase.
 
   0.485
AKI99519.1
Sensory box histidine kinase.
  
 
 0.482
AKI99099.1
Sensor histidine kinase.
 
   0.464
AKI98556.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.455
AKJ03002.1
Circadian input kinase A.
  
 
 0.455
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.