STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00042.1Two-component hybrid sensor and regulator. (500 aa)    
Predicted Functional Partners:
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.953
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.916
AKJ07725.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.899
AKJ01622.1
Circadian input kinase A.
 
 
0.840
AKI99931.1
Diguanylate cyclase/phosphodiesterase.
 
  
0.838
AKI99496.1
PAS/PAC domain protein.
 
 0.801
AKJ02082.1
Chemotaxis protein methyltransferase CheR.
 
 
0.801
AKJ05962.1
Chemotaxis protein methyltransferase CheR.
    0.759
AKJ06723.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.754
AKJ00035.1
Hypothetical protein.
 
 
0.749
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.