Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ00057.1Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein. (729 aa)    
Predicted Functional Partners:
AKJ07760.1
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.922
AKJ07761.1
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.902
AKJ07759.1
Branched-chain amino acid transport ATP-binding protein LivG.
 
  
 0.890
AKJ07758.1
Branched-chain amino acid transport ATP-binding protein LivF.
 
  
 0.853
AKJ00058.1
WD domain G-beta repeat protein.
       0.773
AKJ05020.1
Hypothetical protein.
  
     0.670
AKJ05847.1
tolB protein precursor protein.
 
  
 0.662
AKJ06641.1
Hypothetical protein.
 
   
 0.656
AKJ01138.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.592
AKJ07603.1
PTS system, mannose-specific IIC component.
  
     0.586
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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