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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
AKJ00065.1Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily. (608 aa)    
Predicted Functional Partners:
AKJ02685.1
Flp pilus assembly protein TadB.
 
 
 0.994
AKJ02686.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
 
 0.994
AKJ04907.1
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.
 
 0.993
AKJ02684.1
Flp pilus assembly protein RcpC/CpaB.
 
 
 0.992
AKJ04906.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
  
0.923
AKJ06282.1
Hypothetical protein.
 
     0.798
AKJ04908.1
Type IV prepilin peptidase TadV/CpaA.
 
   
 0.771
AKJ05054.1
Putative ATPase.
 
     0.742
AKJ04189.1
Putative ATPase.
 
     0.724
AKJ00063.1
PE family protein.
       0.532
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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