Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKJ00068.1Molybdate metabolism regulator. (701 aa)    
Predicted Functional Partners:
AKJ04059.1
Hypothetical protein.
 
  
 0.805
AKJ04060.1
Hypothetical protein.
 
    0.789
AKJ04061.1
Mg-chelatase subunit ChlD.
  
     0.775
AKJ05434.1
Hypothetical protein.
   
    0.609
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.595
truA-2
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.595
AKJ03444.1
Hypothetical protein.
 
  
 0.568
AKJ00069.1
Hypothetical protein.
       0.524
AKJ07144.1
GTP cyclohydrolase II.
  
     0.523
AKJ06105.1
RNA:NAD 2'-phosphotransferase.
  
     0.512
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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