STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00068.1Molybdate metabolism regulator. (701 aa)    
Predicted Functional Partners:
AKJ04059.1
Hypothetical protein.
 
  
 0.804
AKJ04060.1
Hypothetical protein.
 
    0.787
AKJ04061.1
Mg-chelatase subunit ChlD.
  
     0.775
AKJ01970.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
   0.577
AKJ03444.1
Hypothetical protein.
 
  
 0.564
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.529
truA-2
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.529
AKJ00069.1
Hypothetical protein.
       0.524
AKJ07144.1
GTP cyclohydrolase II.
  
     0.523
AKJ06105.1
RNA:NAD 2'-phosphotransferase.
  
     0.512
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.