Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00072.1Hypothetical protein. (525 aa)    
Predicted Functional Partners:
AKJ06816.1
Secreted protein Hcp.
 
 
 0.984
AKJ02236.1
Putative cytoplasmic protein USSDB7A.
 
 
 0.977
AKJ06810.1
Putative transmembrane protein.
 
  
 0.965
AKJ06808.1
Type VI secretion lipoprotein/VasD.
 
  
 0.958
AKJ02242.1
Hypothetical protein.
 
  
 0.949
AKJ06809.1
Hypothetical protein.
 
  
 0.949
AKJ02243.1
Hypothetical protein.
 
  
 0.948
AKJ06818.1
Protein ImpG/VasA.
 
  
 0.946
AKJ02235.1
Protein ImpG/VasA.
 
  
 0.945
AKJ02234.1
Protein ImpG/VasA.
 
  
 0.941
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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