Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00076.1 | AKJ00077.1 | AA314_01702 | AA314_01703 | Hypothetical protein. | Small molecule metabolism. | 0.517 |
AKJ00076.1 | AKJ00078.1 | AA314_01702 | AA314_01704 | Hypothetical protein. | Lysine-epsilon oxidase. | 0.481 |
AKJ00076.1 | AKJ00079.1 | AA314_01702 | AA314_01705 | Hypothetical protein. | Dehydrogenase flavoprotein LodB. | 0.478 |
AKJ00077.1 | AKJ00076.1 | AA314_01703 | AA314_01702 | Small molecule metabolism. | Hypothetical protein. | 0.517 |
AKJ00077.1 | AKJ00078.1 | AA314_01703 | AA314_01704 | Small molecule metabolism. | Lysine-epsilon oxidase. | 0.714 |
AKJ00077.1 | AKJ00079.1 | AA314_01703 | AA314_01705 | Small molecule metabolism. | Dehydrogenase flavoprotein LodB. | 0.709 |
AKJ00078.1 | AKJ00076.1 | AA314_01704 | AA314_01702 | Lysine-epsilon oxidase. | Hypothetical protein. | 0.481 |
AKJ00078.1 | AKJ00077.1 | AA314_01704 | AA314_01703 | Lysine-epsilon oxidase. | Small molecule metabolism. | 0.714 |
AKJ00078.1 | AKJ00079.1 | AA314_01704 | AA314_01705 | Lysine-epsilon oxidase. | Dehydrogenase flavoprotein LodB. | 0.946 |
AKJ00079.1 | AKJ00076.1 | AA314_01705 | AA314_01702 | Dehydrogenase flavoprotein LodB. | Hypothetical protein. | 0.478 |
AKJ00079.1 | AKJ00077.1 | AA314_01705 | AA314_01703 | Dehydrogenase flavoprotein LodB. | Small molecule metabolism. | 0.709 |
AKJ00079.1 | AKJ00078.1 | AA314_01705 | AA314_01704 | Dehydrogenase flavoprotein LodB. | Lysine-epsilon oxidase. | 0.946 |