STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00088.1Putative NADP-dependent oxidoreductase. (336 aa)    
Predicted Functional Partners:
AKJ00859.1
Alpha,alpha-trehalose-phosphate synthase.
   
    0.569
AKJ00086.1
Hypothetical protein.
       0.547
AKJ00087.1
Hypothetical protein.
       0.547
AKI98704.1
Aldo/keto reductase.
   
 
 0.542
AKI99769.1
Putative oxidoreductase protein.
   
 
 0.542
AKJ04201.1
Putative aminoglycoside phosphotransferase.
 
    0.536
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.514
AKJ04212.1
Putative acyl-coa dehydrogenase fade36.
 
    0.493
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
0.456
AKI99050.1
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.451
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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