STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00092.1Transcriptional regulator, MerR family. (163 aa)    
Predicted Functional Partners:
AKJ00091.1
Hypothetical protein.
     0.867
AKJ00090.1
Hypothetical protein.
     0.676
AKJ07058.1
Hypothetical protein.
  
     0.586
AKJ06908.1
Hypothetical protein.
  
     0.564
AKI99380.1
ATP synthase F0 sector subunit b.
  
     0.557
AKJ08101.1
Hypothetical protein.
  
     0.557
AKJ02600.1
Cell division protein FtsK.
  
 
 0.555
AKJ01255.1
TolA protein.
 
 
 0.545
AKJ07688.1
Hypothetical protein.
  
     0.543
AKJ07985.1
Glutamate synthase [NADPH] large chain.
  
     0.538
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.