STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00096.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.560
AKJ00095.1
Hypothetical protein.
       0.556
AKI99908.1
L-proline glycine betaine binding ABC transporter protein ProX.
  
    0.543
AKJ00806.1
Hypothetical protein.
  
    0.484
AKJ00807.1
Glutamate synthase [NADPH] large chain.
  
    0.484
AKI98466.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.477
AKI99568.1
RsbR, positive regulator of sigma-B.
   
  
 0.467
AKI99569.1
RsbS, negative regulator of sigma-B.
   
  
 0.467
AKJ06391.1
Putative anti-sigma factor antagonist.
   
  
 0.467
AKJ07736.1
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.467
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (10%) [HD]