Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00098.1Putative membrane-bound ClpP-class protease. (436 aa)    
Predicted Functional Partners:
AKJ00097.1
Putative stomatin/prohibitin-family membrane protease.
 
    0.971
AKJ01968.1
Putative stomatin/prohibitin-family membrane protease.
 
    0.853
AKJ04205.1
Putative stomatin/prohibitin-family membrane protease subunit YbbK.
 
    0.642
AKJ04204.1
Putative activity regulator of membrane protease YbbK.
  
  
 0.621
AKJ00523.1
Hypothetical protein.
 
     0.543
AKI98473.1
Inner membrane protein YqiK.
   
    0.501
AKJ03443.1
Inner membrane protein YqiK.
   
    0.501
AKJ00099.1
Cyanophycinase; Belongs to the peptidase S51 family.
       0.460
AKJ04603.1
Hypothetical protein.
   
  
 0.427
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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