STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00110.13-(3-hydroxy-phenyl)propionate hydroxylase. (548 aa)    
Predicted Functional Partners:
AKJ05645.1
Salicylate hydroxylase.
  
  
 
0.928
AKJ08370.1
Flavodoxin reductase.
  
   
 0.611
AKJ00111.1
Zinc protease.
   
   0.564
AKJ00112.1
Insulinase-like protein.
   
   0.564
AKI99703.1
4-oxalocrotonate decarboxylase.
 
  
 0.516
AKJ04633.1
Secreted oxidoreductase.
  
   
 0.493
AKJ02445.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.468
AKJ00266.1
Hydroxymethylglutaryl-CoA synthase.
   
  
 0.465
AKJ01644.1
Hydroxymethylglutaryl-CoA synthase.
   
  
 0.465
AKI99388.1
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB.
  
  
 0.459
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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