STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00122.1TonB-dependent receptor. (669 aa)    
Predicted Functional Partners:
AKJ00123.1
Hypothetical protein.
       0.773
AKJ02842.1
Hypothetical protein.
  
 
 0.629
AKJ06265.1
Hypothetical protein.
  
 
 0.629
AKJ08275.1
TonB-dependent receptor.
  
   
 0.617
AKI99009.1
Outer membrane vitamin B12 receptor BtuB.
  
  
 0.602
AKJ02130.1
TonB-dependent receptor.
  
   
 0.581
AKJ07628.1
Outer membrane vitamin B12 receptor BtuB.
 
   
 0.559
AKJ00380.1
ABC transporter, permease protein, putative.
  
    0.531
AKJ07624.1
Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.522
AKJ00124.1
Phytochrome, two-component sensor histidine kinase.
       0.475
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.