STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00131.1Hypothetical protein. (281 aa)    
Predicted Functional Partners:
AKJ00133.1
Hypothetical protein.
       0.575
AKJ00132.1
Period clock protein.
       0.543
AKJ01954.1
Hypothetical protein.
  
     0.482
AKJ07603.1
PTS system, mannose-specific IIC component.
  
     0.477
AKJ06613.1
Hypothetical protein.
  
     0.467
AKJ00134.1
Hypothetical protein.
 
     0.462
AKJ06647.1
Hypothetical protein.
  
     0.457
AKJ00756.1
DnaJ-class molecular chaperone CbpA.
  
     0.453
AKJ04329.1
Hypothetical protein.
  
     0.437
AKI98460.1
Tetratricopeptide repeat protein.
  
    0.431
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.