Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00159.1 | AKJ00160.1 | AA314_01785 | AA314_01786 | Protease. | Aspartate aminotransferase. | 0.523 |
AKJ00159.1 | AKJ00259.1 | AA314_01785 | AA314_01885 | Protease. | Radical SAM family enzyme; Similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB. | 0.506 |
AKJ00159.1 | AKJ00734.1 | AA314_01785 | AA314_02360 | Protease. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.468 |
AKJ00159.1 | AKJ01752.1 | AA314_01785 | AA314_03378 | Protease. | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.459 |
AKJ00159.1 | AKJ06333.1 | AA314_01785 | AA314_07959 | Protease. | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | 0.789 |
AKJ00159.1 | AKJ07983.1 | AA314_01785 | AA314_09609 | Protease. | Hypothetical protein. | 0.450 |
AKJ00159.1 | AKJ08015.1 | AA314_01785 | AA314_09641 | Protease. | Putative GTPase. | 0.450 |
AKJ00159.1 | der | AA314_01785 | AA314_05467 | Protease. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.465 |
AKJ00159.1 | trmFO | AA314_01785 | AA314_06660 | Protease. | tRNA:m(5)U-54 MTase gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.461 |
AKJ00159.1 | udk | AA314_01785 | AA314_06060 | Protease. | Uridine kinase. | 0.535 |
AKJ00160.1 | AKJ00159.1 | AA314_01786 | AA314_01785 | Aspartate aminotransferase. | Protease. | 0.523 |
AKJ00259.1 | AKJ00159.1 | AA314_01885 | AA314_01785 | Radical SAM family enzyme; Similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB. | Protease. | 0.506 |
AKJ00734.1 | AKJ00159.1 | AA314_02360 | AA314_01785 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Protease. | 0.468 |
AKJ00734.1 | AKJ06333.1 | AA314_02360 | AA314_07959 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | 0.457 |
AKJ01752.1 | AKJ00159.1 | AA314_03378 | AA314_01785 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Protease. | 0.459 |
AKJ01752.1 | AKJ06333.1 | AA314_03378 | AA314_07959 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | 0.457 |
AKJ06333.1 | AKJ00159.1 | AA314_07959 | AA314_01785 | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | Protease. | 0.789 |
AKJ06333.1 | AKJ00734.1 | AA314_07959 | AA314_02360 | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.457 |
AKJ06333.1 | AKJ01752.1 | AA314_07959 | AA314_03378 | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.457 |
AKJ07983.1 | AKJ00159.1 | AA314_09609 | AA314_01785 | Hypothetical protein. | Protease. | 0.450 |
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