Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AKJ00164.1D-alanyl-D-alanine carboxypeptidase. (183 aa)    
Predicted Functional Partners:
AKJ01983.1
Multimodular transpeptidase-transglycosylase.
     
  0.900
AKJ06928.1
Multimodular transpeptidase-transglycosylase.
     
  0.900
AKJ00165.1
Hypothetical protein.
       0.509
AKJ00166.1
Putative cytochrome P450 hydroxylase.
       0.509
deoD
Purine nucleoside phosphorylase.
  
    0.499
AKJ00163.1
Heavy metal RND efflux outer membrane protein, CzcC family.
     
 0.481
AKJ00161.1
RND efflux system, inner membrane transporter CmeB.
     
 0.459
AKJ00162.1
Putative RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.457
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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