Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00188.1Basic proline-rich protein. (655 aa)    
Predicted Functional Partners:
AKJ00186.1
Alpha-2-macroglobulin domain protein.
 
    0.692
AKJ06930.1
Hypothetical protein.
  
 
   0.672
AKJ00187.1
Hypothetical protein.
 
    0.668
AKJ04586.1
Putative esterase.
  
    0.665
AKJ07382.1
Exonuclease SbcC.
  
 
 
 0.637
AKJ02846.1
Flagellar motor protein.
  
 
   0.620
AKJ06212.1
Hypothetical protein.
  
     0.607
AKJ01243.1
Hypothetical protein.
  
 
   0.602
AKJ00189.1
Abortive infection protein AbiGII.
       0.592
AKJ02914.1
Hypothetical protein.
  
     0.588
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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