Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00199.1Protein-L-isoaspartate O-methyltransferase. (453 aa)    
Predicted Functional Partners:
AKJ01455.1
Phosphoribosyl transferase domain protein.
     0.965
AKJ08320.1
Phosphoribosyl transferase domain protein.
     0.964
AKJ08319.1
Hypothetical protein.
     0.911
pcm
Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
      0.901
AKJ05398.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.826
AKJ00330.1
Hypothetical protein.
   
  
 0.698
AKJ00197.1
Alpha/beta hydrolase fold protein.
  
    0.634
AKJ00198.1
Hypothetical protein.
       0.572
AKJ00200.1
Hypothetical protein.
       0.517
AKI99873.1
Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.516
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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