STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00203.1Activator of 90 kDa heat shock protein ATPase. (138 aa)    
Predicted Functional Partners:
AKJ00204.1
Hypothetical protein.
       0.601
AKI99995.1
Hypothetical protein.
  
     0.507
AKJ05125.1
Hypothetical protein.
  
     0.462
AKJ03671.1
Hypothetical protein.
  
     0.455
AKI98655.1
Sterol desaturase family protein, putative.
  
     0.444
AKI99658.1
Short-chain dehydrogenase/reductase SDR.
  
     0.441
AKJ03408.1
Hypothetical protein.
  
     0.419
def-2
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.414
AKJ05951.1
Phospholipid scramblase 1.
  
     0.408
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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