STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00206.1Endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (420 aa)    
Predicted Functional Partners:
AKJ07602.1
PTS system, mannose-specific IID component.
     
  0.900
AKJ07605.1
PTS system, mannose-specific IIA component.
     
  0.900
AKI98722.1
ROK family Glucokinase.
     
  0.800
AKJ04915.1
Fructokinase.
     
  0.800
AKJ00800.1
Hypothetical protein.
  
     0.710
AKJ07251.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
     0.703
AKJ00561.1
Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
   
 0.668
AKI99431.1
Acetylornithine deacetylase.
  
     0.650
AKJ02040.1
Putative lipoprotein.
  
     0.636
AKJ01536.1
Putative fatty acid desaturase.
  
     0.630
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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