STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00218.1Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (685 aa)    
Predicted Functional Partners:
AKJ05512.1
Peptidase M28.
  
  
 0.693
AKJ05956.1
Alanyl dipeptidyl peptidase.
  
     0.668
AKJ00603.1
Aminopeptidase.
  
  
 0.603
AKJ00349.1
Hypothetical protein.
  
     0.594
AKJ07090.1
Dipeptidyl peptidase IV.
  
     0.535
AKJ00217.1
Hypothetical protein.
       0.532
AKI99808.1
Hypothetical protein.
  
     0.491
AKJ06300.1
Hypothetical protein.
  
     0.491
AKJ07578.1
tolB protein precursor protein.
 
  
 0.489
AKJ00216.1
Lipase.
       0.460
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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