Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00233.1 | AKJ00234.1 | AA314_01859 | AA314_01860 | FHA domain protein. | Metal dependent amidohydrolase. | 0.461 |
AKJ00233.1 | AKJ05717.1 | AA314_01859 | AA314_07343 | FHA domain protein. | General secretion pathway protein D. | 0.445 |
AKJ00233.1 | AKJ05799.1 | AA314_01859 | AA314_07425 | FHA domain protein. | Flagellar biosynthesis protein FlhA. | 0.458 |
AKJ00233.1 | AKJ05829.1 | AA314_01859 | AA314_07455 | FHA domain protein. | Type III secretion bridge between inner and outermembrane lipoprotein. | 0.450 |
AKJ00233.1 | AKJ06421.1 | AA314_01859 | AA314_08047 | FHA domain protein. | Flagellar biosynthesis protein FlhA. | 0.458 |
AKJ00233.1 | AKJ06429.1 | AA314_01859 | AA314_08055 | FHA domain protein. | Type III secretion bridge between inner and outermembrane lipoprotein. | 0.450 |
AKJ00234.1 | AKJ00233.1 | AA314_01860 | AA314_01859 | Metal dependent amidohydrolase. | FHA domain protein. | 0.461 |
AKJ05717.1 | AKJ00233.1 | AA314_07343 | AA314_01859 | General secretion pathway protein D. | FHA domain protein. | 0.445 |
AKJ05717.1 | AKJ05799.1 | AA314_07343 | AA314_07425 | General secretion pathway protein D. | Flagellar biosynthesis protein FlhA. | 0.810 |
AKJ05717.1 | AKJ05829.1 | AA314_07343 | AA314_07455 | General secretion pathway protein D. | Type III secretion bridge between inner and outermembrane lipoprotein. | 0.825 |
AKJ05717.1 | AKJ06421.1 | AA314_07343 | AA314_08047 | General secretion pathway protein D. | Flagellar biosynthesis protein FlhA. | 0.810 |
AKJ05717.1 | AKJ06429.1 | AA314_07343 | AA314_08055 | General secretion pathway protein D. | Type III secretion bridge between inner and outermembrane lipoprotein. | 0.825 |
AKJ05799.1 | AKJ00233.1 | AA314_07425 | AA314_01859 | Flagellar biosynthesis protein FlhA. | FHA domain protein. | 0.458 |
AKJ05799.1 | AKJ05717.1 | AA314_07425 | AA314_07343 | Flagellar biosynthesis protein FlhA. | General secretion pathway protein D. | 0.810 |
AKJ05799.1 | AKJ05829.1 | AA314_07425 | AA314_07455 | Flagellar biosynthesis protein FlhA. | Type III secretion bridge between inner and outermembrane lipoprotein. | 0.911 |
AKJ05799.1 | AKJ06421.1 | AA314_07425 | AA314_08047 | Flagellar biosynthesis protein FlhA. | Flagellar biosynthesis protein FlhA. | 0.907 |
AKJ05799.1 | AKJ06429.1 | AA314_07425 | AA314_08055 | Flagellar biosynthesis protein FlhA. | Type III secretion bridge between inner and outermembrane lipoprotein. | 0.871 |
AKJ05829.1 | AKJ00233.1 | AA314_07455 | AA314_01859 | Type III secretion bridge between inner and outermembrane lipoprotein. | FHA domain protein. | 0.450 |
AKJ05829.1 | AKJ05717.1 | AA314_07455 | AA314_07343 | Type III secretion bridge between inner and outermembrane lipoprotein. | General secretion pathway protein D. | 0.825 |
AKJ05829.1 | AKJ05799.1 | AA314_07455 | AA314_07425 | Type III secretion bridge between inner and outermembrane lipoprotein. | Flagellar biosynthesis protein FlhA. | 0.911 |
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