STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00233.1FHA domain protein. (183 aa)    
Predicted Functional Partners:
AKJ00234.1
Metal dependent amidohydrolase.
   
   0.461
AKJ05799.1
Flagellar biosynthesis protein FlhA.
  
  
 0.458
AKJ06421.1
Flagellar biosynthesis protein FlhA.
  
  
 0.458
AKJ05829.1
Type III secretion bridge between inner and outermembrane lipoprotein.
  
  
 0.450
AKJ06429.1
Type III secretion bridge between inner and outermembrane lipoprotein.
  
  
 0.450
AKJ05717.1
General secretion pathway protein D.
  
  
 0.445
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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