STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00239.1Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (361 aa)    
Predicted Functional Partners:
AKJ00241.1
Phytoene synthase.
  
 0.973
AKJ03573.1
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
  
  
  0.963
AKJ02187.1
Diphosphomevalonate decarboxylase.
  
 0.941
AKJ00073.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.933
AKJ05615.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.933
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 
 0.926
AKJ03510.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.924
AKJ03731.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.906
AKJ02692.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
0.905
AKI98907.1
Phytoene synthase.
  
 0.899
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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