STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00247.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
AKJ00246.1
Geranylgeranyl-diphosphate geranylgeranyl-transferase.
       0.794
AKJ00240.1
Phytoene dehydrogenase.
       0.773
AKJ00241.1
Phytoene synthase.
       0.773
AKJ00242.1
Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
       0.773
AKJ00243.1
Phytoene desaturase.
       0.773
AKJ00244.1
Hydroxyneurosporene synthase.
       0.773
AKJ00245.1
Ceramide glucosyltransferase.
       0.773
AKJ00248.1
Acyltransferase domain protein.
       0.773
AKJ00249.1
Transcriptional regulator, MerR family.
       0.773
AKJ00239.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.741
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.