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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene co-occurrence
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AKJ00259.1Radical SAM family enzyme; Similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB. (450 aa)    
Predicted Functional Partners:
AKJ01789.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.807
AKJ00258.1
CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family.
     
 0.789
AKJ00260.1
Hypothetical protein.
       0.712
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.
 
   
 0.711
rlmN-2
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.
 
   
 0.710
AKJ01167.1
Beta-lactamase domain protein.
   
  
 0.680
AKJ07470.1
Ribosomal RNA large subunit methyltransferase N; Belongs to the radical SAM superfamily. RlmN family.
 
   
 0.672
AKJ01792.1
Type cbb3 cytochrome oxidase biogenesis protein CcoG.
  
  
 0.610
miaB
tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
 
  
 0.609
AKJ00256.1
Hypothetical protein.
       0.603
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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