STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00278.1S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (283 aa)    
Predicted Functional Partners:
AKJ00279.1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
AKI98616.1
Formate dehydrogenase O alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
  0.901
AKI98617.1
Formate dehydrogenase O beta subunit.
     
  0.900
lipA
Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
      0.697
AKI98663.1
Threonine dehydrogenase.
  
 
 0.563
AKJ05669.1
Threonine dehydrogenase.
  
 
 0.563
AKJ07271.1
Threonine dehydrogenase.
  
 
 0.563
AKI99969.1
Putative transmembrane protein.
  
     0.494
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.493
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.493
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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