Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00299.1Isoquinoline 1-oxidoreductase beta subunit. (720 aa)    
Predicted Functional Partners:
AKJ00300.1
Isoquinoline 1-oxidoreductase alpha subunit.
 
 0.995
AKJ03892.1
Isoquinoline 1-oxidoreductase alpha subunit.
 
 0.984
AKJ03691.1
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT.
 
 0.942
AKJ04978.1
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT.
 
 0.926
AKJ00298.1
Uracil permease.
     
 0.804
AKJ02115.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.770
AKJ02114.1
CTP:molybdopterin cytidylyltransferase.
 
   
 0.753
AKJ07372.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.695
AKJ03689.1
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
  
 
 0.694
AKJ04979.1
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
  
 
 0.694
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: medium (50%) [HD]